X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=splitgroupscommand.h;h=a6b8854752f406a2bcaf82d5094c9abe023c2a46;hb=a6cf29fa4dac0909c7582cb1094151d34093ee76;hp=f8bdca17e2a06877a81d4d5eca2fcabd64cef52a;hpb=a44542a3c740cf957cff72ac71742f2fe48b0eaf;p=mothur.git diff --git a/splitgroupscommand.h b/splitgroupscommand.h index f8bdca1..a6b8854 100644 --- a/splitgroupscommand.h +++ b/splitgroupscommand.h @@ -39,14 +39,8 @@ public: void help() { m->mothurOut(getHelpString()); } private: - int readNames(); - int splitFasta(); - vector outputNames; - map > nameMap; - map >::iterator itNames; - GroupMap* groupMap; - + string outputDir, namefile, groupfile, groups, fastafile; vector Groups; bool abort;