X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=splitgroupscommand.cpp;fp=splitgroupscommand.cpp;h=c15ba3a4d588b3eedcaca7713c6d5acb8610aee2;hb=af0a94ea8f02421b2b73e77e68753a2b4c37768e;hp=238eda55e04a3df6e43a2fae8cee5736c4f6febc;hpb=c48d91112209b841444923670dca5454da0e2a4d;p=mothur.git

diff --git a/splitgroupscommand.cpp b/splitgroupscommand.cpp
index 238eda5..c15ba3a 100644
--- a/splitgroupscommand.cpp
+++ b/splitgroupscommand.cpp
@@ -320,7 +320,7 @@ int SplitGroupCommand::runCount(){
 	try {
         
         CountTable ct;
-        ct.readTable(countfile);
+        ct.readTable(countfile, true);
         if (!ct.hasGroupInfo()) { m->mothurOut("[ERROR]: your count file does not contain group info, cannot split by group.\n"); m->control_pressed = true; }
         
         if (m->control_pressed) { return 0; }