X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=splitabundcommand.cpp;h=0fff42804cf702b0ba74cbbe245b51a0f91c1bff;hb=89cfcfcc9e648d2f956f2ff419e64ba7907106d2;hp=2d37e8d459857f7f0161ba87111df0403ff9c827;hpb=deba0af0ccdcb6005ed5b2b82649b137c63fbdf7;p=mothur.git

diff --git a/splitabundcommand.cpp b/splitabundcommand.cpp
index 2d37e8d..0fff428 100644
--- a/splitabundcommand.cpp
+++ b/splitabundcommand.cpp
@@ -212,7 +212,7 @@ SplitAbundCommand::SplitAbundCommand(string option)  {
 			else if (countfile == "not found") { countfile = "";  }	
 			else {
                 m->setCountTableFile(countfile); 
-                ct.readTable(countfile);
+                ct.readTable(countfile, true, false);
             }
             
             if ((namefile != "") && (countfile != "")) {