X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=sphinx%2Findex.rst;h=783020fd6157f77325f9164e5880bba9c1ac512c;hb=HEAD;hp=8bec69dd93129b5fe90d3596de5713186f2b2593;hpb=7b779cdca773a4a6e4091abe4c48db33ab22b49e;p=neurodebian.git diff --git a/sphinx/index.rst b/sphinx/index.rst index 8bec69d..783020f 100644 --- a/sphinx/index.rst +++ b/sphinx/index.rst @@ -1,94 +1,203 @@ -*********************************************** - Welcome to the Debian Neuroscience Repository -*********************************************** +.. _WELCOme: -This repository provides mostly neuroscience-related packages to be used on -Debian systems (or Debian-derivatives like Ubuntu). It contains both unofficial -or prospective packages which are not (yet) available from the main Debian -archive, as well backported or simply rebuilt packages also available -elsewhere. Please see the :ref:`faq` for more information about the goals of -this project. +********************************************* + The Ultimate Neuroscience Software Platform +********************************************* -This service is provided "as is". There is no guarantee that a package -works as expected, so use them at your own risk. They might kill your -system (although that is rather unlikely). You've been warned! +NeuroDebian provides a large collection of popular neuroscience research +software for the Debian_ operating system as well as Ubuntu_ and other +derivatives. Popular packages include :ref:`AFNI `, +:ref:`FSL `, :ref:`PyMVPA ` and +:ref:`many others `. While we do strive to maintain a high level of +quality, we make no guarantee that a given package works as expected, so use +them at your own risk. If you do encounter problems or you just like to say +thanks, simply :ref:`send us an email `. -The repository contains both neuroscience-related packages, as well as general -purpose software which is necessary to resolve dependencies, or such that is -simply useful in the neuroscience context. All featured neuroscience software -packages are available from the :ref:`full package list `. +Learn more about NeuroDebian, the goals of this project, and help us |spread|! + Halchenko, Y. O. & Hanke, M. (2012). `Open is not enough. Let’s take the + next step: An integrated, community-driven computing platform for neuroscience + `_. + *Frontiers in Neuroinformatics*, 6:22. -.. _repository_howto: - -How to use this repository -========================== - -The easiest way to use this repository is to download an APT-configuration file -(`sources.list`). Simply choose your target distribution/release and download -the configuration for a mirror close to you (depending on your browser, you -might have to right-click and choose 'save as'). Once downloaded, put the file -in the `/etc/apt/sources.list.d/` directory on your system. Moving files in -this directory will require superuser privileges, therefore you should probably -download the file into a temporary directory and subsequently move it into -`/etc/apt/sources.list.d/`. APT-configurations are available for the following -releases and repository mirrors: - -.. include:: sources_lists - -.. note:: - Thanks to the `Department of Experimental Psychology at the University of - Magdeburg`_, and the `Department of Psychological and Brain Sciences at Dartmouth - College`_ for hosting a mirror. - - If your are interested in mirroring the repository, please see the :ref:`faq`. - -.. _Department of Experimental Psychology at the University of Magdeburg: http://apsy.gse.uni-magdeburg.de -.. _Department of Psychological and Brain Sciences at Dartmouth College: http://www.dartmouth.edu/~psych - -Once this is done, you have to update the package index. Use your favorite -package manager, e.g. synaptic, adept, or whatever you like. In the terminal -you can use :command:`aptitude` to achieve the same:: - - sudo aptitude update +.. raw:: html -Now, you can proceed to install packages, e.g.:: +
more publications
+
+ +
+
- sudo aptitude install lipsia +.. quotes:: + :random: 1 -.. note:: - Not every package is available for all distributions/releases. For information - about which package version is available for which release and architecture, - please have a look at the corresponding package pages. +.. raw:: html +
+
more testimonials
-Package authentication ----------------------- +.. _Ubuntu: http://www.ubuntu.com -When you start using this repository, you probably get warning messages -like this:: - - The following signatures couldn't be verified because - the public key is not available.` - -Or you will be asked questions like this over and over:: - - WARNING: The following packages cannot be authenticated! - ... - Install these packages without verification [y/N]? - -This is because your APT installation initially does not know the GPG -key that is used to sign the release files of this repository. Making -APT happy again is easy: - -1. Get the key. Either download the `repository key from here - <_static/neuro.debian.net.asc>`_ - or fetch it from http://wwwkeys.pgp.net (2649A5A9). - -2. Now feed the key into APT by invoking:: - - apt-key add #file# - - Where `#file#` has to be replaced with the location of the key file you just - downloaded. You need to have superuser-privileges to do this (either do it - as root or use sudo). +.. _repository_howto: +.. _chap_installation: + +Get NeuroDebian +=============== + +.. include:: reposetup.rst + +.. _news: + +News +==== + +.. raw:: html + + + + +
+ The news widget requires javascript +
+ +.. _identi.ca: http://identi.ca/neurodebian +.. _twitter: http://twitter.com/NeuroDebian + + +.. raw:: html + +
+
+ + + + + + +   + +* **About** +* :ref:`The Team ` +* :ref:`FAQ ` +* :ref:`Blog ` +* :ref:`chap_popularity` +* :ref:`chap_publications` +* :ref:`chap_acknowledgements` +* :ref:`testimonials` +* :ref:`coffeeart` + +.. start a new list + +* **Services** +* :ref:`Software ` +* :ref:`Data ` +* :ref:`Appliance ` +* :ref:`Mirrors ` + +.. start a new list + +* **Community** +* :ref:`Contacts ` +* :ref:`Mailing lists ` +* `OpenHatch `_ +* `Identi.ca `_ +* `Twitter `_ +* `Google+ `_ +* `YouTube `_ +* `GitHub `_ + +.. start a new list + +* **Related** +* `Debian `_ +* `Debian Med `_ +* `INCF `_ +* `NITRC `_ + +.. raw:: html + +
+
+ + +.. toctree:: + :hidden: + + blog/index + faq + thanks + popularity + about + pkgs + spread + vm + publications + coffeeart + photoalbum + projects + testimonials + testimonials-topics + vm_welcome + derivatives + +.. are these supposed to be visible? +.. toctree:: + :hidden: + + machines + todo + +.. toctree:: + :hidden: + :glob: + + pkgs/* + pkglists/* + +.. probably should be purged altogether +.. toctree:: + :hidden: + + livecd + quotes-nihr01 + quotes-nitrc + +.. include:: link_names.txt +.. include:: substitutions.txt + +.. raw:: html + +