X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=sortseqscommand.h;h=6d9c5ed8f2c6183ffdce14f52bff60da3f2316a8;hb=ea4f373c28543cd1002b0dd7dc6e55c526647d59;hp=0685d3bad74dde206fce4872fd165186f15df355;hpb=91a27e0483827c06c21c4fe89558923bbfe86573;p=mothur.git

diff --git a/sortseqscommand.h b/sortseqscommand.h
index 0685d3b..6d9c5ed 100644
--- a/sortseqscommand.h
+++ b/sortseqscommand.h
@@ -25,7 +25,8 @@ public:
     vector<string> setParameters();
     string getCommandName()			{ return "sort.seqs";				}
     string getCommandCategory()		{ return "Sequence Processing";		}
-    string getHelpString();	
+    string getOutputFileNameTag(string, string);
+	string getHelpString();	
     string getCitation() { return "http://www.mothur.org/wiki/Sort.seqs"; }
     string getDescription()		{ return "puts sequences from a fasta, name, group, quality, flow or taxonomy file in the same order"; }
     
@@ -43,7 +44,6 @@ private:
     int readFlow();
     int readName();
     int readGroup();
-    int readAccnos();
     int readTax();
     int readQual();