X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=singlelinkage.cpp;h=1a1b2aee36bed8af6b7d9782e54adcdedc04d466;hb=fdfbfe59134dd7dd3e49d90609d129128ba2d370;hp=fe5adca04ac1659cf88ac3c8df311aeead91709c;hpb=74844a60d80c6dd06e3fb02ee9b928424f9019b0;p=mothur.git

diff --git a/singlelinkage.cpp b/singlelinkage.cpp
index fe5adca..1a1b2ae 100644
--- a/singlelinkage.cpp
+++ b/singlelinkage.cpp
@@ -18,7 +18,7 @@ string SingleLinkage::getTag() {
 
 /***********************************************************************/
 //This function clusters based on the single linkage method.
-void  SingleLinkage::update(){
+void  SingleLinkage::update(double& cutOFF){
 	try {
 		getRowColCells();	
 	
@@ -77,6 +77,7 @@ void  SingleLinkage::update(){
 		clusterBins();
 		clusterNames();
 		// remove also the cell with the smallest distance
+
 		removeCell(rowCells[rowInd], -1 , -1);
 	}
 	catch(exception& e) {