X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=shhhseqscommand.h;h=4da1a840c7d3c591f589ad6ea0103da4d9fbf1ce;hb=55bbd10379db27def51cec72a8819d775f73e45b;hp=7174ac70caf3f55e146d1cdf09e2b15e5b0cfaf4;hpb=0caf3fbabaa3ece404f8ce77f4c883dc5b1bf1dc;p=mothur.git

diff --git a/shhhseqscommand.h b/shhhseqscommand.h
index 7174ac7..4da1a84 100644
--- a/shhhseqscommand.h
+++ b/shhhseqscommand.h
@@ -29,8 +29,10 @@ public:
 	vector<string> setParameters();
 	string getCommandName()			{ return "shhh.seqs";	}
 	string getCommandCategory()		{ return "Sequence Processing";		}
+	
 	string getHelpString();	
-	string getCitation() { return "http://www.mothur.org/wiki/Shhh.seqs"; }
+    string getOutputPattern(string);	
+	string getCitation() { return "Schloss PD, Gevers D, Westcott SL (2011).  Reducing the effects of PCR amplification and sequencing artifacts on 16S rRNA-based studies.  PLoS ONE.  6:e27310.\nQuince C, Lanzen A, Davenport RJ, Turnbaugh PJ (2011).  Removing noise from pyrosequenced amplicons.  BMC Bioinformatics  12:38.\nhttp://www.mothur.org/wiki/Shhh.seqs"; }
 	string getDescription()		{ return "shhh.seqs"; }