X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=sharedutilities.h;fp=sharedutilities.h;h=0000000000000000000000000000000000000000;hb=4a877efa127e56e81a21f53cfdbbfd3bfbe8c4ff;hp=df7e8d3091d811285f15cb49402053ec09a4f535;hpb=a6cf29fa4dac0909c7582cb1094151d34093ee76;p=mothur.git

diff --git a/sharedutilities.h b/sharedutilities.h
deleted file mode 100644
index df7e8d3..0000000
--- a/sharedutilities.h
+++ /dev/null
@@ -1,41 +0,0 @@
-#ifndef SHAREDUTIL_H
-#define SHAREDUTIL_H
-/*
- *  sharedutilities.h
- *  Mothur
- *
- *  Created by Sarah Westcott on 4/9/09.
- *  Copyright 2009 Schloss Lab UMASS Amherst. All rights reserved.
- *
- */
-
-#include "mothur.h"
-#include "mothurout.h"
-
-class SharedRAbundVector;
-class SharedOrderVector;
-
-/**************************************************************************************************/
-
-class SharedUtil {
-	public:
-		SharedUtil() { m = MothurOut::getInstance(); }
-		~SharedUtil() {};
-		
-		void getSharedVectors(vector<string>, vector<SharedRAbundVector*>&, SharedOrderVector*);
-		void getSharedVectorswithReplacement(vector<string>, vector<SharedRAbundVector*>&, SharedOrderVector*);
-		void setGroups(vector<string>&, vector<string>&);  //globaldata->Groups, your tree or group map
-		void setGroups(vector<string>&, vector<string>&, string);  //globaldata->Groups, your tree or group map, mode
-		void setGroups(vector<string>&, vector<string>&, string&, int&, string);  //globaldata->Groups, your tree or group map, allgroups, numGroups, mode
-		void getCombos(vector<string>&, vector<string>, int&); //groupcomb, globaldata->Groups, numcomb
-		void updateGroupIndex(vector<string>&, map<string, int>&); //globaldata->Groups, groupmap->groupIndex
-		bool isValidGroup(string, vector<string>);
-		
-	private:
-		MothurOut* m;
-		
-};
-
-/**************************************************************************************************/
-
-#endif