X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=sharedutilities.cpp;h=5776b3685c06b6eb7fe8e419c791b3ee6a4ecde6;hb=31c6076fe649829d9b8f773f6f12b627d3ef5d9b;hp=fc1b3350599ebb6db17da3d6f02f977a1f793bb1;hpb=d59f91eb1230d2c7867a92cb86138b7003100ab4;p=mothur.git

diff --git a/sharedutilities.cpp b/sharedutilities.cpp
index fc1b335..5776b36 100644
--- a/sharedutilities.cpp
+++ b/sharedutilities.cpp
@@ -111,6 +111,7 @@ void SharedUtil::getSharedVectorswithReplacement(vector<string> Groups, vector<S
 //need to have mode because different commands require different number of valid groups
 void SharedUtil::setGroups(vector<string>& userGroups, vector<string>& allGroups) {
 	try {
+//cout << "groups size" << userGroups.size() << endl;
 		if (userGroups.size() != 0) {
 			if (userGroups[0] != "all") {
 				//check that groups are valid
@@ -125,7 +126,7 @@ void SharedUtil::setGroups(vector<string>& userGroups, vector<string>& allGroups
 				
 				//if the user only entered invalid groups
 				if (userGroups.size() == 0) { 
-					cout << "When using the groups parameter you must have at least 1 valid groups. I will run the command using all the groups in your groupfile." << endl; 
+					cout << "You provided no valid groups. I will run the command using all the groups in your groupfile." << endl; 
 					for (int i = 0; i < allGroups.size(); i++) {
 						userGroups.push_back(allGroups[i]);
 					}