X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=sharedsorabund.cpp;fp=sharedsorabund.cpp;h=0000000000000000000000000000000000000000;hb=4a877efa127e56e81a21f53cfdbbfd3bfbe8c4ff;hp=9a1bd63d7bd2a5b459c6b9955afa77cebc23ed7c;hpb=a6cf29fa4dac0909c7582cb1094151d34093ee76;p=mothur.git

diff --git a/sharedsorabund.cpp b/sharedsorabund.cpp
deleted file mode 100644
index 9a1bd63..0000000
--- a/sharedsorabund.cpp
+++ /dev/null
@@ -1,37 +0,0 @@
-/*
- *  sharedsorabund.cpp
- *  Dotur
- *
- *  Created by Sarah Westcott on 1/8/09.
- *  Copyright 2009 Schloss Lab UMASS Amherst. All rights reserved.
- *
- */
-
-#include "sharedsorabund.h"
-
-/***********************************************************************/
-
-EstOutput SorAbund::getValues(vector<SharedRAbundVector*> shared) {
-	try {
-		EstOutput UVest;
-		UVest.resize(2,0);
-		data.resize(1,0);
-		
-		UVest = uv->getUVest(shared);
-		
-		//UVest[0] is Uest, UVest[1] is Vest
-		data[0] = (2 * UVest[0] * UVest[1]) / ((float)(UVest[0] + UVest[1]));
-		
-		if (isnan(data[0]) || isinf(data[0])) { data[0] = 0; }
-		data[0] = 1-data[0];
-		
-		return data;
-	}
-	catch(exception& e) {
-		m->errorOut(e, "SorAbund", "getValues");
-		exit(1);
-	}
-}
-
-/***********************************************************************/
-