X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=sharedjsd.h;fp=sharedjsd.h;h=cec0faa190db3ddb05d8e045a41acf5d39b40d66;hb=a2cde58c1e72199498a2142983ef040dce36da10;hp=0000000000000000000000000000000000000000;hpb=3e8b80da722e11c72bce957e2f42a6e884dd02b6;p=mothur.git

diff --git a/sharedjsd.h b/sharedjsd.h
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+//
+//  sharedjsd.h
+//  Mothur
+//
+//  Created by SarahsWork on 12/9/13.
+//  Copyright (c) 2013 Schloss Lab. All rights reserved.
+//
+
+#ifndef Mothur_sharedjsd_h
+#define Mothur_sharedjsd_h
+
+#include "calculator.h"
+
+/***********************************************************************/
+//Jensen-Shannon divergence (JSD)
+class JSD : public Calculator  {
+	
+public:
+	JSD() :  Calculator("jsd", 1, false) {};
+	EstOutput getValues(SAbundVector*) {return data;};
+	EstOutput getValues(vector<SharedRAbundVector*>);
+	string getCitation() { return "http://www.mothur.org/wiki/JSD"; }
+private:
+	
+};
+
+/***********************************************************************/
+
+
+#endif