X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=sharedcommand.h;h=861632ce7d6a8026c14b463387b9d8dbb320522d;hb=8dd3c225255d7084e3aff8740aa4f1f1cabb367a;hp=add6ee8d4a6ebdfd86d6a08d750c7fe88cc3bd35;hpb=e150b0b0664caec517485ee6d69dcdade6dcae77;p=mothur.git

diff --git a/sharedcommand.h b/sharedcommand.h
index add6ee8..861632c 100644
--- a/sharedcommand.h
+++ b/sharedcommand.h
@@ -32,7 +32,8 @@ public:
 	string getCommandCategory()		{ return "OTU-Based Approaches";	}
 	string getHelpString();	
 	string getCitation() { return "http://www.mothur.org/wiki/Make.shared"; }
-	
+	string getDescription()		{ return "make a shared file from a list and group file"; }
+
 	int execute(); 
 	void help() { m->mothurOut(getHelpString()); }	
 	
@@ -42,6 +43,7 @@ private:
 	int readOrderFile();
 	bool isValidGroup(string, vector<string>);
 	int eliminateZeroOTUS(vector<SharedRAbundVector*>&);
+	int ListGroupSameSeqs();
 	
 	SharedListVector* SharedList;
 	InputData* input;