X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=sffmultiplecommand.h;h=1a492a82155fe0a7314b8c2ec54a9a4b37017909;hb=2ff2d03fbe46ce8cf2738bff4403a52be4f31e2f;hp=ee83d727ad3b3a1e910f4b3cb633eae53938f87a;hpb=1a5c2356c1b955c6ec024b2baf9f46377ee7c72e;p=mothur.git

diff --git a/sffmultiplecommand.h b/sffmultiplecommand.h
index ee83d72..1a492a8 100644
--- a/sffmultiplecommand.h
+++ b/sffmultiplecommand.h
@@ -42,7 +42,8 @@ private:
 		int end;
 		linePair(int i, int j) : start(i), end(j) {}
 	};
-
+    
+    string inputDir;
 	string filename, outputDir, flowOrder, lookupFileName, minDelta;
 	vector<string> outputNames;
 	bool abort, trim, large, flip, allFiles, keepforward, append, makeGroup;