X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=sffmultiplecommand.h;fp=sffmultiplecommand.h;h=ee83d727ad3b3a1e910f4b3cb633eae53938f87a;hb=1a5c2356c1b955c6ec024b2baf9f46377ee7c72e;hp=4ab2c972557500c059b48ef38f712483f5731231;hpb=79a7d3273749b08d4f9f8dfe350c964ff0c4351e;p=mothur.git diff --git a/sffmultiplecommand.h b/sffmultiplecommand.h index 4ab2c97..ee83d72 100644 --- a/sffmultiplecommand.h +++ b/sffmultiplecommand.h @@ -26,8 +26,9 @@ public: vector setParameters(); string getCommandName() { return "sff.multiple"; } string getCommandCategory() { return "Sequence Processing"; } - string getOutputFileNameTag(string, string); + string getHelpString(); + string getOutputPattern(string); string getCitation() { return "http://www.mothur.org/wiki/Sff.multiple"; } string getDescription() { return "run multiple sff files through, sffinfo, trim.flow, shhh.flows and trim.seqs combining the results"; }