X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=sffmultiplecommand.cpp;h=365bb93dc503b65025da52ec2fc11bf21dad5b92;hb=aca78ed4a47dff8672ea8fd93cef0dfbaf0f7495;hp=f75662b30f258ecf30b3e20e79a76362f633c069;hpb=89cfcfcc9e648d2f956f2ff419e64ba7907106d2;p=mothur.git

diff --git a/sffmultiplecommand.cpp b/sffmultiplecommand.cpp
index f75662b..365bb93 100644
--- a/sffmultiplecommand.cpp
+++ b/sffmultiplecommand.cpp
@@ -747,17 +747,17 @@ int SffMultipleCommand::createProcesses(vector<string> sffFiles, vector<string>
 		
 		//loop through and create all the processes you want
 		while (process != processors) {
-			int pid = fork();
+			pid_t pid = fork();
 			
 			if (pid > 0) {
 				processIDS.push_back(pid);  //create map from line number to pid so you can append files in correct order later
 				process++;
 			}else if (pid == 0){
-				num = driver(sffFiles, oligosFiles, lines[process].start, lines[process].end, fasta + toString(getpid()) + ".temp", name  + toString(getpid()) + ".temp", group  + toString(getpid()) + ".temp");
+				num = driver(sffFiles, oligosFiles, lines[process].start, lines[process].end, fasta + m->mothurGetpid(process) + ".temp", name  + m->mothurGetpid(process) + ".temp", group  + m->mothurGetpid(process) + ".temp");
                 
                 //pass numSeqs to parent
 				ofstream out;
-				string tempFile = toString(getpid()) + ".num.temp";
+				string tempFile = m->mothurGetpid(process) + ".num.temp";
 				m->openOutputFile(tempFile, out);
 				out << num << '\t' << outputNames.size() << endl;
                 for (int i = 0; i < outputNames.size(); i++) {  out << outputNames[i] << endl;  }