X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=sffinfocommand.h;h=d8eb853dae6892711a9004ae9ad670032f47228e;hb=3e2465c16d187247ce3befd29811c2d5dfc15ee8;hp=7cf357e07499ad5797dec8bbc1e647c163993aa8;hpb=af27acb766f6947c45e1eb65438d878c7ea48ef3;p=mothur.git diff --git a/sffinfocommand.h b/sffinfocommand.h index 7cf357e..d8eb853 100644 --- a/sffinfocommand.h +++ b/sffinfocommand.h @@ -40,6 +40,9 @@ struct Header { unsigned short clipAdapterLeft; unsigned short clipAdapterRight; string name; //length depends on nameLength + string timestamp; + string region; + string xy; Header() { headerLength=0; nameLength=0; numBases=0; clipQualLeft=0; clipQualRight=0; clipAdapterLeft=0; clipAdapterRight=0; } ~Header() { } @@ -80,6 +83,7 @@ private: int readCommonHeader(ifstream&, CommonHeader&); int readHeader(ifstream&, Header&); int readSeqData(ifstream&, seqRead&, int, int); + int decodeName(string&, string&, string&, string); int printCommonHeader(ofstream&, CommonHeader&); int printHeader(ofstream&, Header&);