X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=setlogfilecommand.h;h=0354971a0b2d92cf2edc7cf742b80beae1a9be17;hb=6b32d112bb60e9f7eb6d4407a4eed4c49b67bced;hp=d2b5c3d63bc3490d6a478fd3ced457706422f2ec;hpb=8bc3e5b38c2317a1715f53be22fa96455868c281;p=mothur.git

diff --git a/setlogfilecommand.h b/setlogfilecommand.h
index d2b5c3d..0354971 100644
--- a/setlogfilecommand.h
+++ b/setlogfilecommand.h
@@ -19,21 +19,26 @@ class SetLogFileCommand : public Command {
 	
 public:
 	SetLogFileCommand(string);
-	SetLogFileCommand() {}
-	~SetLogFileCommand();
-	vector<string> getRequiredParameters();
-	vector<string> getValidParameters();
-	vector<string> getRequiredFiles();
-	map<string, vector<string> > getOutputFiles() { return outputTypes; }
-	int execute();
-	void help();
+	SetLogFileCommand() { setParameters(); abort = true; calledHelp = true; }
+	~SetLogFileCommand(){}
+	
+	vector<string> setParameters();
+	string getCommandName()			{ return "set.logfile";		}
+	string getCommandCategory()		{ return "General";			}
+	
+	string getHelpString();	
+    string getOutputPattern(string){ return ""; }	
+	string getCitation() { return "http://www.mothur.org/wiki/Set.logfile"; }
+	string getDescription()		{ return "set logfile name"; }
+
+	int execute(); 
+	void help() { m->mothurOut(getHelpString()); }	
 	
 private:
 	CommandFactory* commandFactory;
 	string name;
 	bool abort, append;
 	vector<string> outputNames;
-	map<string, vector<string> > outputTypes;
 		
 };