X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=setlogfilecommand.cpp;h=576a37c11a26a656d34a9af69972dc4c3a329233;hb=006601d68abe8d0061f77e8d28323b160750e343;hp=0a3dfc974f1d6ca45352b712efea37a2df02daf0;hpb=1d898dc6edaf9e9f287fab53bf1f21fb29757a17;p=mothur.git

diff --git a/setlogfilecommand.cpp b/setlogfilecommand.cpp
index 0a3dfc9..576a37c 100644
--- a/setlogfilecommand.cpp
+++ b/setlogfilecommand.cpp
@@ -51,11 +51,10 @@ SetLogFileCommand::SetLogFileCommand(string option)  {
 		
 		//allow user to run help
 		if(option == "help") { help(); abort = true; calledHelp = true; }
+		else if(option == "citation") { citation(); abort = true; calledHelp = true;}
 		
 		else {
-			//valid paramters for this command
-			string Array[] =  {"name","append","outputdir","inputdir"};
-			vector<string> myArray (Array, Array+(sizeof(Array)/sizeof(string)));
+			vector<string> myArray = setParameters();
 			
 			OptionParser parser(option);
 			map<string, string> parameters = parser.getParameters();