X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=setdircommand.h;h=0d12e05be43ce8ec055fa5a9bdc39dad62f9bca2;hb=77ac47e1ea0b5a0c6f55eb25e6bc7d7494ed3ad2;hp=565b839aadb6ce8f2f440e6bd8b75be44afba227;hpb=fbaa6c7ac44f857c1ece7c8199e9e7e09b4bbe74;p=mothur.git

diff --git a/setdircommand.h b/setdircommand.h
index 565b839..0d12e05 100644
--- a/setdircommand.h
+++ b/setdircommand.h
@@ -19,14 +19,23 @@ class SetDirectoryCommand : public Command {
 	
 public:
 	SetDirectoryCommand(string);
-	~SetDirectoryCommand();
-	int execute();
-	void help();
+	SetDirectoryCommand() { abort = true; calledHelp = true; setParameters(); }
+	~SetDirectoryCommand(){}
+	
+	vector<string> setParameters();
+	string getCommandName()			{ return "set.dir";		}
+	string getCommandCategory()		{ return "General";		}
+	string getHelpString();	
+	
+	int execute(); 
+	void help() { m->mothurOut(getHelpString()); }	
 	
 private:
 	CommandFactory* commandFactory;
 	string output, input, tempdefault;
 	bool abort;
+	vector<string> outputNames;
+	
 		
 };