X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=setdircommand.cpp;h=ca8c62d43821652d6bf4ea868e9444d54c256ff4;hb=4522aebe2246c5f47875d5c8cc505f1b615bfc7e;hp=b0d12b87bc49f4d3b6e9cae63558ba622b199701;hpb=8e3e7b1e124f45cb1f2ca9d764ff67fa9b2e532b;p=mothur.git

diff --git a/setdircommand.cpp b/setdircommand.cpp
index b0d12b8..ca8c62d 100644
--- a/setdircommand.cpp
+++ b/setdircommand.cpp
@@ -92,6 +92,8 @@ SetDirectoryCommand::SetDirectoryCommand(string option)  {
 			if (temp == "not found") {  debug = false;  nodebug=true; }
             else {  debug = m->isTrue(temp); }
             m->debug = debug;
+            
+            if (debug) { m->mothurOut("Setting [DEBUG] flag.\n"); }
 				
 			if ((input == "") && (output == "") && (tempdefault == "") && nodebug) {	
 				m->mothurOut("You must provide either an input, output, tempdefault or debug for the set.outdir command."); m->mothurOutEndLine(); abort = true;