X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=sequencecountparser.cpp;h=5349da09ff719a5ac07a85ecb4015c44d41121ee;hb=a38cc7240f45bd39aa60d0df75825c17af0a082c;hp=1300c0f1023fdd24d53c7bb9033be1d5c1c3e5d6;hpb=01f8d2c7d982a6209211f5abbcf2a086fdf60d0a;p=mothur.git

diff --git a/sequencecountparser.cpp b/sequencecountparser.cpp
index 1300c0f..5349da0 100644
--- a/sequencecountparser.cpp
+++ b/sequencecountparser.cpp
@@ -16,7 +16,7 @@ SequenceCountParser::SequenceCountParser(string countfile, string fastafile) {
 		
 		//read count file
 		CountTable countTable;
-		countTable.readTable(countfile);
+		countTable.readTable(countfile, true, false);
 		
 		//initialize maps
 		namesOfGroups = countTable.getNamesOfGroups();