X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=seqsummarycommand.h;h=a62572673c3d7497007ab959157fd41dfb6b124b;hb=058715887611e00dc18324cb0bd4a4a8472530b3;hp=e6b3b879b8f25e72d2151ae69fae8a75f211909d;hpb=315e38cf393c82be238da5b32574f225a020d25c;p=mothur.git

diff --git a/seqsummarycommand.h b/seqsummarycommand.h
index e6b3b87..a625726 100644
--- a/seqsummarycommand.h
+++ b/seqsummarycommand.h
@@ -23,6 +23,24 @@ public:
 private:
 	bool abort;
 	string fastafile, outputDir;
+	int processors;
+	
+	struct linePair {
+		unsigned long int start;
+		int num;
+		linePair(unsigned long int i, long int j) : start(i), num(j) {}
+	};
+	vector<linePair*> lines;
+	vector<int> processIDS;
+	
+	int createProcessesCreateSummary(vector<int>&, vector<int>&, vector<int>&, vector<int>&, vector<int>&, string, string);
+	int driverCreateSummary(vector<int>&, vector<int>&, vector<int>&, vector<int>&, vector<int>&, string, string, linePair*);	
+	int setLines(string);
+
+	#ifdef USE_MPI
+	int MPICreateSummary(int, int, vector<int>&, vector<int>&, vector<int>&, vector<int>&, vector<int>&, MPI_File&, MPI_File&, vector<unsigned long int>&);	
+	#endif
+
 
 };