X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=seqsummarycommand.h;h=58fbc0a8b4e9dddec4745f65882ac9b6b6dd8002;hb=2bb20fb79f19b8bda48492d89f8e8b7389431413;hp=e6b3b879b8f25e72d2151ae69fae8a75f211909d;hpb=315e38cf393c82be238da5b32574f225a020d25c;p=mothur.git diff --git a/seqsummarycommand.h b/seqsummarycommand.h index e6b3b87..58fbc0a 100644 --- a/seqsummarycommand.h +++ b/seqsummarycommand.h @@ -23,6 +23,24 @@ public: private: bool abort; string fastafile, outputDir; + int processors; + + struct linePair { + int start; + int num; + linePair(long int i, long int j) : start(i), num(j) {} + }; + vector lines; + vector processIDS; + + int createProcessesCreateSummary(vector&, vector&, vector&, vector&, vector&, string, string); + int driverCreateSummary(vector&, vector&, vector&, vector&, vector&, string, string, linePair*); + int setLines(string); + + #ifdef USE_MPI + int MPICreateSummary(int, int, vector&, vector&, vector&, vector&, vector&, MPI_File&, MPI_File&, vector&); + #endif + };