X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=seqsummarycommand.cpp;h=620de95c333cdee1360157f7aa7068f3ce1f1f62;hb=a150db3c2bfd7b76420048a1e94ebe397f2c6045;hp=2f3638d2ae8bfc9f051c60520c3bf9429afc9a45;hpb=1d898dc6edaf9e9f287fab53bf1f21fb29757a17;p=mothur.git diff --git a/seqsummarycommand.cpp b/seqsummarycommand.cpp index 2f3638d..620de95 100644 --- a/seqsummarycommand.cpp +++ b/seqsummarycommand.cpp @@ -15,6 +15,7 @@ vector SeqSummaryCommand::setParameters(){ try { CommandParameter pfasta("fasta", "InputTypes", "", "", "none", "none", "none",false,true); parameters.push_back(pfasta); CommandParameter pname("name", "InputTypes", "", "", "none", "none", "none",false,false); parameters.push_back(pname); + CommandParameter pprocessors("processors", "Number", "", "1", "", "", "",false,false); parameters.push_back(pprocessors); CommandParameter pinputdir("inputdir", "String", "", "", "", "", "",false,false); parameters.push_back(pinputdir); CommandParameter poutputdir("outputdir", "String", "", "", "", "", "",false,false); parameters.push_back(poutputdir); @@ -66,6 +67,7 @@ SeqSummaryCommand::SeqSummaryCommand(string option) { //allow user to run help if(option == "help") { help(); abort = true; calledHelp = true; } + else if(option == "citation") { citation(); abort = true; calledHelp = true;} else { vector myArray = setParameters();