X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=seqerrorcommand.cpp;h=9a7b814873f53239e734aee7733af51cf49dab6d;hb=ce8794490ab1d83adcdb2b92e0302a1e43e17adf;hp=8fd6368154773bcc38e2b950d7b170c88be2186e;hpb=1f3d51cfdbe3e28c780501b7ed82d64fe27dba98;p=mothur.git

diff --git a/seqerrorcommand.cpp b/seqerrorcommand.cpp
index 8fd6368..9a7b814 100644
--- a/seqerrorcommand.cpp
+++ b/seqerrorcommand.cpp
@@ -782,7 +782,7 @@ int SeqErrorCommand::driver(string filename, string qFileName, string rFileName,
 				if (queryFile.eof()) { break; }
 			#endif
 			
-			if(index % 100 == 0){	m->mothurOut(toString(index) + '\n');	}
+			if(index % 100 == 0){	m->mothurOut(toString(index));	m->mothurOutEndLine(); }
 		}
 		queryFile.close();
 		if(qFileName != "" && rFileName != ""){  reportFile.close(); qualFile.close(); }
@@ -790,7 +790,7 @@ int SeqErrorCommand::driver(string filename, string qFileName, string rFileName,
 		errorSeqFile.close();
 		
 		//report progress
-		if(index % 100 != 0){	m->mothurOut(toString(index) + '\n');	}
+		if(index % 100 != 0){	m->mothurOut(toString(index));	m->mothurOutEndLine(); }
 		
 		return index;
 	}