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diff --git a/sensspeccommand.h b/sensspeccommand.h
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+#ifndef SENSSPECCOMMAND_H
+#define SENSSPECCOMMAND_H
+
+
+/*
+ *  sensspeccommand.h
+ *  Mothur
+ *
+ *  Created by Pat Schloss on 7/6/10.
+ *  Copyright 2010 Schloss Lab. All rights reserved.
+ *
+ */
+
+#include "mothur.h"
+#include "command.hpp"
+#include "listvector.hpp"
+#include "inputdata.h"
+
+class SensSpecCommand : public Command {
+	
+public:
+	SensSpecCommand(string);
+	SensSpecCommand();
+	~SensSpecCommand(){}
+	
+	vector<string> setParameters();
+	string getCommandName()			{ return "sens.spec";				}
+	string getCommandCategory()		{ return "OTU-Based Approaches";	}
+	string getHelpString();	
+	string getCitation() { return "Schloss PD, Westcott SL (2011). Assessing and improving methods used in OTU-based approaches for 16S rRNA gene sequence analysis. Appl Environ Microbiol. \nhttp://www.mothur.org/wiki/Sens.spec"; }
+	string getDescription()		{ return "sens.spec"; }
+
+	int execute(); 
+	void help() { m->mothurOut(getHelpString()); }	
+	
+private:
+	int processPhylip();
+	int processColumn();
+	void setUpOutput();
+	void outputStatistics(string, string);
+	
+	string listFile, distFile, nameFile, sensSpecFileName, phylipfile, columnfile;
+	string outputDir;
+	string format;
+	vector<string> outputNames;
+	set<string> labels; //holds labels to be used
+
+	long int truePositives, falsePositives, trueNegatives, falseNegatives;
+	bool abort, allLines;
+	bool hard;
+	//string lineLabel;
+	double cutoff;
+	int precision;
+	
+	int fillSeqMap(map<string, int>&, ListVector*&);
+	int fillSeqPairSet(set<string>&, ListVector*&);
+	int process(map<string, int>&, string, bool&, string&);
+	int process(set<string>&, string, bool&, string&, int);
+
+};
+
+#endif
+
+
+