X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=secondarystructurecommand.h;fp=secondarystructurecommand.h;h=a82cf4e5edd89a5536cfbecafb5def8f6a7e3ed4;hb=cc1838f288a7712d44929fca5175ce89f3a58f12;hp=d94cc95582f8d1482233a3cac0aee4b418dcc925;hpb=462fca6d24fd15ca035358ff70bcfae52c3281c3;p=mothur.git

diff --git a/secondarystructurecommand.h b/secondarystructurecommand.h
index d94cc95..a82cf4e 100644
--- a/secondarystructurecommand.h
+++ b/secondarystructurecommand.h
@@ -44,6 +44,7 @@ class AlignCheckCommand : public Command {
 		int seqLength;
 		
 		void readMap();
+		statData getStats(string sequence);
 };
 
 /**************************************************************************************************/