X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=screenseqscommand.h;h=771113da1bda0ee34859faaa39b2fe7be1bc2672;hb=6c2b1e530a5c0bb87040e58a3e410097acdfcc3d;hp=291d8e6d1acd4605f4827159f10aa74269e1a771;hpb=57b3c96832667c1b70d4d526331f52e3d49e8237;p=mothur.git diff --git a/screenseqscommand.h b/screenseqscommand.h index 291d8e6..771113d 100644 --- a/screenseqscommand.h +++ b/screenseqscommand.h @@ -23,6 +23,7 @@ public: vector setParameters(); string getCommandName() { return "screen.seqs"; } string getCommandCategory() { return "Sequence Processing"; } + string getOutputFileNameTag(string, string); string getHelpString(); string getCitation() { return "http://www.mothur.org/wiki/Screen.seqs"; } string getDescription() { return "enables you to keep sequences that fulfill certain user defined criteria"; } @@ -60,7 +61,6 @@ private: vector outputNames; vector optimize; map nameMap; - int readNames(); int getSummary(vector&); int createProcessesCreateSummary(vector&, vector&, vector&, vector&, vector&, string);