X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=sam.c;h=ad4325bb4b8e8436d21e921478ed00467aac0e6b;hb=87d9ea7a580d0d1a58b8f0dca3ba3528ca118e46;hp=07524c0213b30bcae3870f8424da38daef43ac49;hpb=d0e30eec1158752010659982342a611fc91ae8e3;p=samtools.git

diff --git a/sam.c b/sam.c
index 07524c0..ad4325b 100644
--- a/sam.c
+++ b/sam.c
@@ -12,7 +12,7 @@ bam_header_t *bam_header_dup(const bam_header_t *h0)
 	int i;
 	h = bam_header_init();
 	*h = *h0;
-	h->hash = 0;
+	h->hash = h->dict = h->rg2lib = 0;
 	h->text = (char*)calloc(h->l_text + 1, 1);
 	memcpy(h->text, h0->text, h->l_text);
 	h->target_len = (uint32_t*)calloc(h->n_targets, 4);
@@ -62,7 +62,6 @@ samfile_t *samopen(const char *fn, const char *mode, const void *aux)
 					fprintf(stderr, "[samopen] no @SQ lines in the header.\n");
 			} else fprintf(stderr, "[samopen] SAM header is present: %d sequences.\n", fp->header->n_targets);
 		}
-		sam_header_parse_rg(fp->header);
 	} else if (mode[0] == 'w') { // write
 		fp->header = bam_header_dup((const bam_header_t*)aux);
 		if (mode[1] == 'b') { // binary