X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=sam%2FMakefile;h=bb89e00da2ed01bf2a44ff488f911ac528f32a62;hb=0a534802ee9fa3d488995a68621ff04f0fc6be7f;hp=db183330d1fb76ce4fa0d17d8dab65afdfbeb65a;hpb=fc69cf6af24c0550e55447fc82f01cb6f90c1c42;p=rsem.git

diff --git a/sam/Makefile b/sam/Makefile
index db18333..bb89e00 100644
--- a/sam/Makefile
+++ b/sam/Makefile
@@ -1,6 +1,13 @@
 CC=			gcc
-CFLAGS=		-g -Wall -O2 #-m64 #-arch ppc
-DFLAGS=		-D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_USE_KNETFILE -D_CURSES_LIB=1
+
+CFLAGS_EXTRA=
+#CFLAGS_EXTRA= -L/usr/include/ncurses
+CFLAGS=		-g -Wall -O2 $(CFLAGS_EXTRA) #-m64 #-arch ppc
+
+DFLAGS_EXTRA=
+#DFLAGS_EXTRA= -Dexpl=exp -Dlogl=log
+DFLAGS=		-D_FILE_OFFSET_BITS=64 -D_LARGEFILE64_SOURCE -D_USE_KNETFILE -D_CURSES_LIB=1 $(DFLAGS_EXTRA)
+
 KNETFILE_O=	knetfile.o
 LOBJS=		bgzf.o kstring.o bam_aux.o bam.o bam_import.o sam.o bam_index.o	\
 			bam_pileup.o bam_lpileup.o bam_md.o razf.o faidx.o bedidx.o \