X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=rsem-generate-ngvector;h=137fa03db354e8e7078a8dd16b535549034f949e;hb=1d786dca8b4c9c1e2176a28a669d2d16cd93e395;hp=0f44fd4daa2f153e60d3874a09c948aebc606b62;hpb=52f1bd6f44f9b2630b839f192fb9ece18581983b;p=rsem.git diff --git a/rsem-generate-ngvector b/rsem-generate-ngvector index 0f44fd4..137fa03 100755 --- a/rsem-generate-ngvector +++ b/rsem-generate-ngvector @@ -2,7 +2,8 @@ use Getopt::Long; use Pod::Usage; -use File::Basename; +use FindBin; +use lib $FindBin::Bin; use strict; use rsem_perl_utils; @@ -16,7 +17,7 @@ GetOptions("k=i" => \$k, pod2usage(-verbose => 2) if ($help == 1); pod2usage(-msg => "Invalid number of arguments!", -exitval => 2, -verbose => 2) if (scalar(@ARGV) != 2); -my ($fn, $dir, $suf) = fileparse($0); +my $dir = "$FindBin::Bin/"; my $command = ""; $command = $dir."EBSeq/rsem-for-ebseq-calculate-clustering-info $k $ARGV[0] $ARGV[1].ump";