X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=reversecommand.h;fp=reversecommand.h;h=0000000000000000000000000000000000000000;hb=4a877efa127e56e81a21f53cfdbbfd3bfbe8c4ff;hp=f0fdfa887890607ea3efa2ccfdc44c7b95c1b7c7;hpb=a6cf29fa4dac0909c7582cb1094151d34093ee76;p=mothur.git diff --git a/reversecommand.h b/reversecommand.h deleted file mode 100644 index f0fdfa8..0000000 --- a/reversecommand.h +++ /dev/null @@ -1,40 +0,0 @@ -#ifndef REVERSECOMMAND_H -#define REVERSECOMMAND_H - -/* - * reversecommand.h - * Mothur - * - * Created by Pat Schloss on 6/6/09. - * Copyright 2009 Patrick D. Schloss. All rights reserved. - * - */ - -#include "command.hpp" - -class ReverseSeqsCommand : public Command { -public: - ReverseSeqsCommand(string); - ReverseSeqsCommand(); - ~ReverseSeqsCommand() {} - - vector setParameters(); - string getCommandName() { return "reverse.seqs"; } - string getCommandCategory() { return "Sequence Processing"; } - string getHelpString(); - string getCitation() { return "http://www.mothur.org/wiki/Reverse.seqs"; } - string getDescription() { return "outputs a fasta file containing the reverse-complements"; } - - - int execute(); - void help() { m->mothurOut(getHelpString()); } - -private: - - bool abort; - string fastaFileName, qualFileName, outputDir; - vector outputNames; - -}; - -#endif