X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=removeseqscommand.h;h=474951a9feaee7d497417cf2a03f206367056241;hb=6ede3bf5c0a9eedb23f24577a97da81ab3e1f7df;hp=d99151ec022dfdafcfa2327998466549cbcb3eda;hpb=ca9ac1d80c62f57270b0dcd49410ebe08a8aecd6;p=mothur.git

diff --git a/removeseqscommand.h b/removeseqscommand.h
index d99151e..474951a 100644
--- a/removeseqscommand.h
+++ b/removeseqscommand.h
@@ -23,8 +23,11 @@ class RemoveSeqsCommand : public Command {
 		vector<string> setParameters();
 		string getCommandName()			{ return "remove.seqs";				}
 		string getCommandCategory()		{ return "Sequence Processing";		}
-		string getHelpString();	
-	
+		string getOutputFileNameTag(string, string);
+	string getHelpString();	
+		string getCitation() { return "http://www.mothur.org/wiki/Remove.seqs"; }
+		string getDescription()		{ return "removes sequences from a list, fasta, name, group, alignreport, quality or taxonomy file"; }
+
 		int execute(); 
 		void help() { m->mothurOut(getHelpString()); }	
 	
@@ -39,7 +42,6 @@ class RemoveSeqsCommand : public Command {
 		int readName();
 		int readGroup();
 		int readAlign();
-		void readAccnos();
 		int readList();
 		int readTax();
 		int readQual();