X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=removerarecommand.h;h=388ec2d762e763ef1623d573eb90fa4074dbb039;hb=74d3aaf0f85080ea3cfb1f1871e706bab9f48392;hp=7db54b409672af8937c456d731fffecf91cbe6c2;hpb=259b6adf51ef0639cafd88cf862e4ffd5e0c7576;p=mothur.git

diff --git a/removerarecommand.h b/removerarecommand.h
index 7db54b4..388ec2d 100644
--- a/removerarecommand.h
+++ b/removerarecommand.h
@@ -13,6 +13,7 @@
 
 #include "command.hpp"
 #include "listvector.hpp"
+#include "globaldata.hpp"
 
 class RemoveRareCommand : public Command {
 	
@@ -29,6 +30,7 @@ public:
 	void help();	
 	
 private:
+	GlobalData* globaldata;
 	string sabundfile, rabundfile, sharedfile, groupfile, listfile, outputDir, groups, label;
 	int nseqs, allLines;
 	bool abort, byGroup;
@@ -40,6 +42,7 @@ private:
 	int processRabund();
 	int processList();
 	int processShared();
+	int processLookup(vector<SharedRAbundVector*>&, ofstream&);
 	
 };