X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=removerarecommand.cpp;h=24b616560de3bed794d423f4cb7a3544f0d48f5f;hb=8dd3c225255d7084e3aff8740aa4f1f1cabb367a;hp=351ace6db7ea98c033514086004091e6352f663e;hpb=55386dddad84cc1140d736cabaf4dd0ae16f2e01;p=mothur.git diff --git a/removerarecommand.cpp b/removerarecommand.cpp index 351ace6..24b6165 100644 --- a/removerarecommand.cpp +++ b/removerarecommand.cpp @@ -220,7 +220,7 @@ RemoveRareCommand::RemoveRareCommand(string option) { string temp = validParameter.validFile(parameters, "nseqs", false); if (temp == "not found") { m->mothurOut("nseqs is a required parameter."); m->mothurOutEndLine(); abort = true; } - else { convert(temp, nseqs); } + else { m->mothurConvert(temp, nseqs); } temp = validParameter.validFile(parameters, "bygroup", false); if (temp == "not found") { temp = "f"; } byGroup = m->isTrue(temp);