X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=removelineagecommand.h;h=f644972c2672aa19509059c78d631ef0618eba28;hb=1a968f34ae2d2680eaf189a197d1a21b8dfd6c03;hp=a756d24f583be82eac03634ebcd8496c4fd687b6;hpb=90708fe9701e3827e477c82fb3652539c3bf2a0d;p=mothur.git diff --git a/removelineagecommand.h b/removelineagecommand.h index a756d24..f644972 100644 --- a/removelineagecommand.h +++ b/removelineagecommand.h @@ -23,8 +23,9 @@ class RemoveLineageCommand : public Command { vector setParameters(); string getCommandName() { return "remove.lineage"; } string getCommandCategory() { return "Phylotype Analysis"; } - string getOutputFileNameTag(string, string); + string getHelpString(); + string getOutputPattern(string); string getCitation() { return "http://www.mothur.org/wiki/Remove.lineage"; } string getDescription() { return "removes sequences from a list, fasta, name, group, alignreport or taxonomy file from a given taxonomy or set of taxonomies"; }