X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=removelineagecommand.h;h=a5caec8e4c3e0f04ec7744489c3f27c0a495e38d;hb=6c2b1e530a5c0bb87040e58a3e410097acdfcc3d;hp=bda398b76b7cf8b0b2bf86c618e8adff71a1ff3a;hpb=a44542a3c740cf957cff72ac71742f2fe48b0eaf;p=mothur.git

diff --git a/removelineagecommand.h b/removelineagecommand.h
index bda398b..a5caec8 100644
--- a/removelineagecommand.h
+++ b/removelineagecommand.h
@@ -23,7 +23,8 @@ class RemoveLineageCommand : public Command {
 		vector<string> setParameters();
 		string getCommandName()			{ return "remove.lineage";			}
 		string getCommandCategory()		{ return "Phylotype Analysis";		}
-		string getHelpString();	
+		string getOutputFileNameTag(string, string);
+	string getHelpString();	
 		string getCitation() { return "http://www.mothur.org/wiki/Remove.lineage"; }
 		string getDescription()		{ return "removes sequences from a list, fasta, name, group, alignreport or taxonomy file from a given taxonomy or set of taxonomies"; }
 
@@ -42,7 +43,6 @@ class RemoveLineageCommand : public Command {
 		int readAlign();
 		int readList();
 		int readTax();	
-		string removeConfidences(string);
 		vector< map<string, float> > getTaxons(string);
 };