X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=removegroupscommand.cpp;h=1e5fe11de39f34b30f59249895bcf393506e32f9;hb=9bbd9b071066b7b11c1ab95aa01942abc933e0fb;hp=4f4b1580582b953c3b8318acc68345cc8d45ae48;hpb=1a5c2356c1b955c6ec024b2baf9f46377ee7c72e;p=mothur.git

diff --git a/removegroupscommand.cpp b/removegroupscommand.cpp
index 4f4b158..1e5fe11 100644
--- a/removegroupscommand.cpp
+++ b/removegroupscommand.cpp
@@ -369,7 +369,7 @@ int RemoveGroupsCommand::execute(){
                 m->mothurOut("\n[NOTE]: The count file should contain only unique names, so mothur assumes your fasta, list and taxonomy files also contain only uniques.\n\n");
             }
             CountTable ct;
-            ct.readTable(countfile);
+            ct.readTable(countfile, true);
             if (!ct.hasGroupInfo()) { m->mothurOut("[ERROR]: your count file does not contain group info, aborting.\n"); return 0; }
             
             vector<string> gNamesOfGroups = ct.getNamesOfGroups();