X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=readotucommand.h;h=6ec35412c3c82206bef933787c820ca36e2158d2;hb=29c0d3ec01be5372807eb86261100d77de253787;hp=c38d0a5f3d38916681db8b254fe11b5c9eec03f2;hpb=cd37904452dc95b183ff313ff05720c562902487;p=mothur.git diff --git a/readotucommand.h b/readotucommand.h index c38d0a5..6ec3541 100644 --- a/readotucommand.h +++ b/readotucommand.h @@ -14,7 +14,6 @@ #include "inputdata.h" #include "groupmap.h" #include "sharedcommand.h" -#include "parselistcommand.h" /* The read.otu must be run before you execute a collect.single, rarefaction.single, summary.single, collect.shared, rarefaction.shared or summary.shared command. Mothur will generate a .list, .rabund and .sabund @@ -40,10 +39,9 @@ public: private: GlobalData* globaldata; - ReadOTUFile* read; + //ReadOTUFile* read; InputData* input; Command* shared; - Command* parselist; GroupMap* groupMap; string filename, listfile, orderfile, sharedfile, line, label, groupfile, sabundfile, rabundfile, format;