X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=readotucommand.cpp;h=9f27057ece85672069c9ebf219c08b459b648efc;hb=154e089bcd37c2c2f773e53ffb88a20170b27037;hp=eeb8cd6e3d910d30e7fde7b6d20947a693d739ed;hpb=58cf1d08fee8c64334979075fa57bcafb035a2ed;p=mothur.git

diff --git a/readotucommand.cpp b/readotucommand.cpp
index eeb8cd6..9f27057 100644
--- a/readotucommand.cpp
+++ b/readotucommand.cpp
@@ -14,7 +14,7 @@ ReadOtuCommand::ReadOtuCommand(){
 	try {
 		globaldata = GlobalData::getInstance();
 		filename = globaldata->inputFileName;
-		read = new ReadPhilFile(filename);
+		read = new ReadOTUFile(filename);
 		if (globaldata->getFormat() == "shared") {
 			//read in group map info.
 			groupMap = new GroupMap(globaldata->getGroupFile());
@@ -43,6 +43,8 @@ int ReadOtuCommand::execute(){
 		read->read(&*globaldata); 
 		if (globaldata->getFormat() == "shared") {
 			groupMap->readMap();
+			
+			//if (globaldata->gGroupmap != NULL) { delete globaldata->gGroupmap;  }
 			globaldata->gGroupmap = groupMap;
 		
 			shared = new SharedCommand();