X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=readdistcommand.h;h=984b4a78ec40fc5b9d643cd51434ef4255d3e239;hb=c53ef46b40b97c00e32bfd8c3924ce8c51b5cd7b;hp=937ca3f0797c58bc24dc3a239ac5f7c0e4624339;hpb=47faf5463d44570ad66148384763db1c8238b563;p=mothur.git diff --git a/readdistcommand.h b/readdistcommand.h index 937ca3f..984b4a7 100644 --- a/readdistcommand.h +++ b/readdistcommand.h @@ -27,7 +27,12 @@ class GlobalData; class ReadDistCommand : public Command { public: ReadDistCommand(string); + ReadDistCommand() {} ~ReadDistCommand(); + vector getRequiredParameters(); + vector getValidParameters(); + vector getRequiredFiles(); + map > getOutputFiles() { return outputTypes; } int execute(); void help(); @@ -41,6 +46,8 @@ private: string distFileName, format, method; string phylipfile, columnfile, namefile, groupfile, outputDir; NameAssignment* nameMap; + vector outputNames; + map > outputTypes; bool abort, sim;