X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=readdistcommand.cpp;h=f19bf115d9e5f7d084b6007f1d738bcf0d33d494;hb=477e76a8a79b60f6cd4253324dd830bdea25e3e9;hp=6d38f4e4d55cde380570dd53aaa847f96600550f;hpb=cd10743907df223b7dd5b3a3deb20fde758b8ed7;p=mothur.git

diff --git a/readdistcommand.cpp b/readdistcommand.cpp
index 6d38f4e..f19bf11 100644
--- a/readdistcommand.cpp
+++ b/readdistcommand.cpp
@@ -8,6 +8,8 @@
  */
 
 #include "readdistcommand.h"
+#include "readphylip.h"
+#include "readcolumn.h"
 
 ReadDistCommand::ReadDistCommand(){
 	try {
@@ -21,7 +23,7 @@ ReadDistCommand::ReadDistCommand(){
 		else if (format == "matrix") { 
 				groupMap = new GroupMap(globaldata->getGroupFile());
 				groupMap->readMap();
-				if (globaldata->gGroupmap != NULL) { delete globaldata->gGroupmap;  }
+				//if (globaldata->gGroupmap != NULL) { delete globaldata->gGroupmap;  }
 				globaldata->gGroupmap = groupMap;
 		}
 		
@@ -70,6 +72,8 @@ int ReadDistCommand::execute(){
 			ifstream in;
 			openInputFile(filename, in);
 			matrix = new FullMatrix(in); //reads the matrix file
+			//memory leak prevention
+			//if (globaldata->gMatrix != NULL) { delete globaldata->gMatrix;  }
 			globaldata->gMatrix = matrix; //save matrix for coverage commands
 		}else {
 			read->read(nameMap);