X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=readblast.h;h=fd32380c20c1a7145a8c65d07700b54d2d5bc63b;hb=5cbb9328400eabc6689da26738aceee394666dfa;hp=536d1af05db87dce20deaf344bd6410b952a61cb;hpb=74844a60d80c6dd06e3fb02ee9b928424f9019b0;p=mothur.git diff --git a/readblast.h b/readblast.h index 536d1af..fd32380 100644 --- a/readblast.h +++ b/readblast.h @@ -25,7 +25,7 @@ public: ReadBlast(string, float, float, int, bool, bool); //blastfile, cutoff, penalty, length of overlap, min or max bsr, hclusterWanted ~ReadBlast() {} - void read(NameAssignment*); + int read(NameAssignment*); SparseMatrix* getDistMatrix() { return matrix; } vector getOverlapMatrix() { return overlap; } string getOverlapFile() { return overlapFile; } @@ -42,7 +42,7 @@ private: vector overlap; MothurOut* m; - void readNames(NameAssignment*); + int readNames(NameAssignment*); }; /*******************************************************************************************/