X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=rarefactsharedcommand.h;fp=rarefactsharedcommand.h;h=ee16221903ce2ee738cd7b941ca90c5b57e05c04;hb=8bc3e5b38c2317a1715f53be22fa96455868c281;hp=1bcddb5257f56967a63b66f0740e648811509204;hpb=f663afa231c9bc1b5e18e0ea3bdd2b2ee784f5b2;p=mothur.git

diff --git a/rarefactsharedcommand.h b/rarefactsharedcommand.h
index 1bcddb5..ee16221 100644
--- a/rarefactsharedcommand.h
+++ b/rarefactsharedcommand.h
@@ -22,7 +22,12 @@ class RareFactSharedCommand : public Command {
 	
 public:
 	RareFactSharedCommand(string);
+	RareFactSharedCommand();
 	~RareFactSharedCommand();
+	vector<string> getRequiredParameters();
+	vector<string> getValidParameters();
+	vector<string> getRequiredFiles();
+	map<string, vector<string> > getOutputFiles() { return outputTypes; }
 	int execute();	
 	void help();
 	
@@ -42,6 +47,7 @@ private:
 	set<string> labels; //holds labels to be used
 	string label, calc, groups, outputDir;
 	vector<string>  Estimators, Groups, outputNames;
+	map<string, vector<string> > outputTypes;
 
 
 };