X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=rarefactcommand.cpp;fp=rarefactcommand.cpp;h=82251c4a8fad67ea36fea2d7232b2f9171d5e3f5;hb=8f7f4fc08b8c70d9ef0f79607813dba4e926e102;hp=1c04bc4384fb632db099867821b6ffb3b4d79e95;hpb=8bcd146863e2a44d6d4fb5dee2d3f17e975deb45;p=mothur.git

diff --git a/rarefactcommand.cpp b/rarefactcommand.cpp
index 1c04bc4..82251c4 100644
--- a/rarefactcommand.cpp
+++ b/rarefactcommand.cpp
@@ -243,6 +243,11 @@ RareFactCommand::RareFactCommand(string option)  {
 				 if (calc == "default")  {  calc = "sobs";  }
 			}
 			m->splitAtDash(calc, Estimators);
+			if (m->inUsersGroups("citation", Estimators)) { 
+				ValidCalculators validCalc; validCalc.printCitations(Estimators); 
+				//remove citation from list of calcs
+				for (int i = 0; i < Estimators.size(); i++) { if (Estimators[i] == "citation") {  Estimators.erase(Estimators.begin()+i); break; } }
+			}
 
 			string temp;
 			temp = validParameter.validFile(parameters, "freq", false);			if (temp == "not found") { temp = "100"; }