X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=raredisplay.h;fp=raredisplay.h;h=a87596225b818c525fdd97156f5baf64b1dceb71;hb=0caf3fbabaa3ece404f8ce77f4c883dc5b1bf1dc;hp=0000000000000000000000000000000000000000;hpb=1b73ff67c83892a025e597dabd9df6fe7b58206a;p=mothur.git

diff --git a/raredisplay.h b/raredisplay.h
new file mode 100644
index 0000000..a875962
--- /dev/null
+++ b/raredisplay.h
@@ -0,0 +1,37 @@
+#ifndef RAREDISPLAY_H
+#define RAREDISPLAY_H
+
+#include "sabundvector.hpp"
+#include "calculator.h"
+#include "fileoutput.h"
+#include "display.h"
+
+/***********************************************************************/
+
+class RareDisplay : public Display {
+	
+public:
+	RareDisplay(Calculator* calc, FileOutput* file) : estimate(calc), output(file), nIters(1), index(0) {};
+	~RareDisplay()					{	delete estimate; delete output;		};
+	void init(string);
+	void reset();
+	void update(SAbundVector*);
+	void update(vector<SharedRAbundVector*> shared, int numSeqs, int numGroupComb);
+	void close();
+	bool isCalcMultiple() { return estimate->getMultiple(); }
+	
+	void outputTempFiles(string);
+	void inputTempFiles(string);
+	
+private:
+	Calculator* estimate;
+	FileOutput* output;
+	string label;
+	vector<int> seqs;  
+	vector<double> results;
+	vector<double> var;
+	int index, nIters;
+};
+
+#endif
+