X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=raredisplay.cpp;h=3d50b2612f9c9cc8df9de5b48e5e55e260806fc6;hb=dc08123b7f14e2305e5bb2b3a8fcef96fc829b07;hp=983ed102adc08f5629e061013b9d19c1fa49a28a;hpb=c5c7502f435e1413c19e373dab1dfebcaa67588d;p=mothur.git

diff --git a/raredisplay.cpp b/raredisplay.cpp
index 983ed10..3d50b26 100644
--- a/raredisplay.cpp
+++ b/raredisplay.cpp
@@ -15,6 +15,7 @@ void RareDisplay::init(string label){
 	try {
 		this->label = label;
 		if(nIters != 1){
+			tempInFile.clear();
 			openOutputFile(tempOutName, tempOutFile);
 			openInputFile(tempInName, tempInFile);
 		}
@@ -68,9 +69,9 @@ void RareDisplay::update(SAbundVector* rank){
 };
 
 /***********************************************************************/
-void RareDisplay::update(SharedRAbundVector* shared1, SharedRAbundVector* shared2, int numSeqs, int numGroupComb) {
+void RareDisplay::update(vector<SharedRAbundVector*> shared, int numSeqs, int numGroupComb) {
 	try {
-		vector<double> data = estimate->getValues(shared1, shared2); 
+		vector<double> data = estimate->getValues(shared); 
 		double newNSeqs = data[0];
 		
 		if(nIters != 1){
@@ -134,6 +135,7 @@ void RareDisplay::reset(){
 
 void RareDisplay::close(){
 	try {
+		
 		output->initFile(label);
 	
 		openInputFile(tempInName, tempInFile);