X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=randomforest.cpp;fp=randomforest.cpp;h=2ae0eb595c1c8d5f989c44a5e561a0ff3dac2d2b;hb=e1de1a55a2a0f87bd8e2fbedc0b583aee04a4ba4;hp=bb8e2d565cb6348594b7c3e5cd229dd40ac37d76;hpb=c2f279a697c7267b5d91882087ab91f7e6653aa2;p=mothur.git

diff --git a/randomforest.cpp b/randomforest.cpp
index bb8e2d5..2ae0eb5 100644
--- a/randomforest.cpp
+++ b/randomforest.cpp
@@ -78,7 +78,7 @@ int RandomForest::calcForrestVariableImportance(string filename) {
         
         vector< pair<int, double> > globalVariableRanks;
         for (int i = 0; i < globalVariableImportanceList.size(); i++) {
-            cout << "[" << i << ',' << globalVariableImportanceList[i] << "], ";
+            //cout << "[" << i << ',' << globalVariableImportanceList[i] << "], ";
             if (globalVariableImportanceList[i] > 0) {
                 pair<int, double> globalVariableRank(0, 0.0);
                 globalVariableRank.first = i;
@@ -118,7 +118,7 @@ int RandomForest::populateDecisionTrees() {
         for (int i = 0; i < numDecisionTrees; i++) {
           
             if (m->control_pressed) { return 0; }
-            if (((i+1) % 10) == 0) {  m->mothurOut("Creating " + toString(i+1) + " (th) Decision tree\n");  }
+            if (((i+1) % 100) == 0) {  m->mothurOut("Creating " + toString(i+1) + " (th) Decision tree\n");  }
           
             // TODO: need to first fix if we are going to use pointer based system or anything else
             DecisionTree* decisionTree = new DecisionTree(dataSet, globalDiscardedFeatureIndices, OptimumFeatureSubsetSelector(optimumFeatureSubsetSelectionCriteria), treeSplitCriterion, featureStandardDeviationThreshold);