X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=quitcommand.cpp;h=2c302e9e6b4f195c7d4acb1df97fd6110ea02ad5;hb=6b32d112bb60e9f7eb6d4407a4eed4c49b67bced;hp=6b90f4b15c1cf64ae04bed98db42138f0edcf2d7;hpb=20a2d0350a737a434c89f303662d64a8eeea7b05;p=mothur.git

diff --git a/quitcommand.cpp b/quitcommand.cpp
index 6b90f4b..2c302e9 100644
--- a/quitcommand.cpp
+++ b/quitcommand.cpp
@@ -10,17 +10,19 @@
 #include "quitcommand.h"
 
 //**********************************************************************************************************************
+QuitCommand::QuitCommand(string option) {
+		abort = false; calledHelp = false;   
+		
+		//allow user to run help
+		if(option == "help") { help(); abort = true; calledHelp = true; }
+		else if(option == "citation") { citation(); abort = true; calledHelp = true;}
 
-QuitCommand::QuitCommand(){}
-
+}
 //**********************************************************************************************************************
-
 QuitCommand::~QuitCommand(){}
-
 //**********************************************************************************************************************
-
 int QuitCommand::execute(){
+	if (abort == true) { return 0; }
 	return 1;
 }
-
 //**********************************************************************************************************************