X-Git-Url: https://git.donarmstrong.com/?a=blobdiff_plain;f=pipelinepdscommand.h;h=4697f405f6045cabad7f225641c4544a36ca6e9f;hb=c9a311f0c621a2e88abf7b2efbe74e9aa1e88a8d;hp=c4b4646881f5c1b6bfbd9a682bda765a70c4193f;hpb=e150b0b0664caec517485ee6d69dcdade6dcae77;p=mothur.git

diff --git a/pipelinepdscommand.h b/pipelinepdscommand.h
index c4b4646..4697f40 100644
--- a/pipelinepdscommand.h
+++ b/pipelinepdscommand.h
@@ -26,8 +26,11 @@ public:
 	vector<string> setParameters();
 	string getCommandName()			{ return "pipeline.pds";	}
 	string getCommandCategory()		{ return "Hidden";			}
+	string getOutputFileNameTag(string, string) { return ""; }
 	string getHelpString();	
-	string getCitation() { return "http://www.mothur.org/wiki/Pipeline.pds"; }
+	string getCitation() { return "Schloss PD, Gevers D, Westcott SL (2011).  Reducing the effects of PCR amplification and sequencing artifacts on 16S rRNA-based studies.  PLoS ONE.  6:e27310.\nhttp://www.mothur.org/wiki/Pipeline.pds"; }
+	string getDescription()		{ return "pat's pipeline"; }
+
 	
 	int execute(); 
 	void help() { m->mothurOut(getHelpString()); }